Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913403.1_cds_XP_016463472.1_56595
CDS Infomation

[gene=LOC107786500] [db_xref=GeneID:107786500] [protein=triacylglycerol lipase SDP1-like] [protein_id=XP_016463472.1] [location=join(21330..22760,23663..23806,24207..25190)] [gbkey=CDS]
Sequence

ATGGATATAAGTAATGAGGCTACTATTGACTTCTTTTCAATTGGACCTACTACGATATTG
GGTCGAACAATCGCCTTTAGAGTGTTGTTCTGCAAATCAATTTCACAGTTGAGGCATCAC
CTGTTTCATTTCTTGATATATTACTTGTACAAGTTCAAGAATGGTTTGTCATACTACTTG
ACACCCTTAATTTCGTGGTTGCACCCTCGTAATCCACAAGGGATATTGGCATTGGTGACG
CTTCTCGCCTTCTTGTTGAGGCGATACACGAATGTAAAAATCAAGGCTGAGATGGCCTAT
AGGAGGAAGTTTTGGAGGAATATGATGAGATCTGCATTGACTTATGAGGAGTGGGCTCAT
GCTGCCAAGATGCTAGATAAAGAGACCCCTAAAATGAATGAGGCAGATCTTTATGATGTA
GAATTAGTTCGAAATAAACTCCAAGAGCTTCGACATCGTAGGCAAGAGGGTTCTCTGAGG
GATATCATATTCTGTATGAGAGCTGACCTTGTTAGGAATCTTGGTAATATGTGCAATCCA
GAACTTCACAAGGGAAGGCTTCATGTGCCTAGACTGATTAAGGATTATATTGATGAGGTT
TCAACTCAGTTGAGAATGGTATGCGACTCTGATTCGGAGGAGCTTCTCTTGGAAGAGAAA
CTTGCTTTCATGCATGAAACAAGACATGCCTTTGGTAGGACAGCTTTGCTTTTAAGTGGA
GGTGCTTCTTTAGGAGCTTTCCATGTGGGCGTGGTGAAAACACTTGTAGAACACAAGCTG
ATGCCACGGATAATTGCTGGTTCAAGTGTCGGCTCGATTATGTGCTCCATAGTTGCAACT
CGATCTTGGCCTGAGCTCCAGAGTTTTTTCGAGGACTCCTGGCACTCTTTGCAATTTTTC
GATCAGTTGGGTGGGATTTTTACTATTTTCAAGAGGGTCATGACCCAGGGTGCTGTACAT
GAAATCAGACAGCTGCAGGTGCTGTTACGTAATCTCACGAATAATCTTACTTTCCAAGAA
GCCTATGACATGACTGGTAGAGTTCTGGGGATTACTGTTTGCTCGCCTAGGAAACATGAA
CCTCCTAGATGCTTGAACTACTTGACTTCACCTCATGTTGTTATATGGAGTGCTGTTACC
GCTTCTTGTGCCTTTCCTGGTCTCTTCGAAGCTCAAGAACTTATGGCAAAGGATAGAAGT
GGAGATCTTGTTCCATATCACCCACCATTTCATTTGGGTCCTGATGCCACTTCTAGTGCA
TCTTCTCGTCGTTGGAGGGATGGTAGCTTGGAGGTTGATTTGCCAATGATGCAGCTAAAG
GAGCTCTTCAATGTCAATCACTTCATTGTGAGCCAGGCGAATCCGCACATCGCTCCACTG
CTGAGGATCAAAGAGTTTGTAAGAGCTTATGGAGGCAACTTTGCTGCCAAGCTTGCTCAA
CTTACGGAAATGGAGGTGAAGCATAGATGCAATCAGGTATTAGAACTTGGTTTTCCCTTG
GGAGGATTGGCAAAGCTTTTTGCTCAAGAATGGGAGGGTGACGTAACAGTTGTAATGCCT
GCCACTCTAGCTCAGTACTCAAAAATCATACAGAATCCCTCTACTCTGGAGCTGCAAAAG
GCAGCAAATCAAGGAAGAAGGTGCACTTGGGAAAAACTCTCAGCCATGAAAGCAAACTGT
GGAATTGAGCTTGCACTTGATGAATGTGTTGCTATACTGAACCACATGCGTAGACTGAAA
AGGAGTGCTGAGAGAGCGGCTGCTGCTTCACATGGCTTGGCAAGCACTGTCAGATTTAAC
GCTTCCAGAAGAATTCCTTCTTGGAACTGCATTGCACGAGAGAATTCAACAGGCTCCCTT
GAAGATTTTCTTGCGGATGTTGCTGCTTCACATCATCAAGGAGGCAGTGGTTCGGGGGCG
CATGTTAACCGTAATTGGCGAACACACCGGAATGCACATGATGGTAGTGACAGTGAGCCG
GAAAATGTGGACCTTAATTCTTGGACAAGATCGGGTGGTCCTTTGATGAGGACAACATCA
GCTGATAAGTTTATTGACTTTGTCCAGAACTTGGAAATTGGTTCGCGATTGAACAAAGGA
TTGACTATTGACCTCAACAATATTGTTCCTCAGATGGCAGGCAGGGACCATTTCTCCCCG
AGCCCAAGGGTAACAACACCTGATAGAAGTTCAGATACAGAATTTGATCAAAGAGATTTT
AGTTATAAGGTCCCTGCGAGTAGTTCAAGCATTATGGTAGGTGAAGGTGACCTTCTGCAG
CCTGAAAGGACTAACAGCGGTATTGTCTTCAATGTGGTAAGGAAAGGAGACTTGACCCCA
TCGAACAGAAGCCTTGATTCAGAAAATAATAGTTCCGTGCAGGACGCAGTTGCTGAGTGC
GTGCAACTTGAAAGTCCAGAAAAGGAGATGGATATTAGCTCAGTATCCGAGGATGGTGAG
AATGATGTTGGGCAAGGAAGTAGGGTCAATGAAGTTGATTGTAGTGAAAATCGTTCATCA
ATCGGTGATGGCAACGATAAGCAAGTTATTGATACTTGA

Peptide Sequence

PEP ID

XP_016463472.1
PEP Infomation

PREDICTED: triacylglycerol lipase SDP1-like [Nicotiana tabacum]
Sequence

MDISNEATIDFFSIGPTTILGRTIAFRVLFCKSISQLRHHLFHFLIYYLYKFKNGLSYYL
TPLISWLHPRNPQGILALVTLLAFLLRRYTNVKIKAEMAYRRKFWRNMMRSALTYEEWAH
AAKMLDKETPKMNEADLYDVELVRNKLQELRHRRQEGSLRDIIFCMRADLVRNLGNMCNP
ELHKGRLHVPRLIKDYIDEVSTQLRMVCDSDSEELLLEEKLAFMHETRHAFGRTALLLSG
GASLGAFHVGVVKTLVEHKLMPRIIAGSSVGSIMCSIVATRSWPELQSFFEDSWHSLQFF
DQLGGIFTIFKRVMTQGAVHEIRQLQVLLRNLTNNLTFQEAYDMTGRVLGITVCSPRKHE
PPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGDLVPYHPPFHLGPDATSSA
SSRRWRDGSLEVDLPMMQLKELFNVNHFIVSQANPHIAPLLRIKEFVRAYGGNFAAKLAQ
LTEMEVKHRCNQVLELGFPLGGLAKLFAQEWEGDVTVVMPATLAQYSKIIQNPSTLELQK
AANQGRRCTWEKLSAMKANCGIELALDECVAILNHMRRLKRSAERAAAASHGLASTVRFN
ASRRIPSWNCIARENSTGSLEDFLADVAASHHQGGSGSGAHVNRNWRTHRNAHDGSDSEP
ENVDLNSWTRSGGPLMRTTSADKFIDFVQNLEIGSRLNKGLTIDLNNIVPQMAGRDHFSP
SPRVTTPDRSSDTEFDQRDFSYKVPASSSSIMVGEGDLLQPERTNSGIVFNVVRKGDLTP
SNRSLDSENNSSVQDAVAECVQLESPEKEMDISSVSEDGENDVGQGSRVNEVDCSENRSS
IGDGNDKQVIDT

Transcript Sequence

Gene sequence data has not been registered.